Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
candidate regulatory elements
65
target gene predictions
chromatin state
17
accessible chromatin
5
histone modifications
3
eQTL
3
gene expression
3
variant allelic effects
1
binding sites
Date released
101
September, 2022
58
February, 2021
19
November, 2021
6
June, 2020
4
February, 2024
4
May, 2021
3
January, 2022
3
March, 2024
2
March, 2020
Available data
194
bed bed3+
11
bigWig
3
tsv
Organism
200
Homo sapiens
Biosample type
177
tissue
cell line
23
primary cell
Organ
854
epithelium
541
kidney
384
connective tissue
327
brain
287
musculature of body
229
pancreas
222
vasculature
200
intestine
195
heart
188
limb
170
blood vessel
167
lung
115
liver
113
skin of body
111
extraembryonic component
108
large intestine
95
stomach
91
eye
76
adipose tissue
70
embryo
64
small intestine
63
artery
59
adrenal gland
55
placenta
51
ureter
43
mammary gland
43
penis
38
esophagus
38
thymus
36
gonad
32
spinal cord
31
bone element
28
spleen
21
nerve
21
prostate gland
19
ovary
19
thyroid gland
17
lymphatic vessel
17
uterus
16
testis
16
vein
15
skeleton
14
bronchus
14
lymphoid tissue
13
bodily fluid
12
blood
12
mouth
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
181
AMP
19
ENCODE
Genome assembly (visualization)
194
hg19
22
GRCh38
annotation_type!
chromatin state
biosample_type!
cell line
BIOSAMPLE
TYPE
200 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
binding sites
tissue
small intestine
29
17
1
1
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
Peyer's patch
7
3
1
+ See 15 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
paneth cell
1
1
+ See 2 more…
See all biosamples
Download