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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
chromatin state
10
accessible chromatin
6
binding sites
histone modifications
2
eQTL
2
gene expression
Date released
65
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
129
bed bed3+
3
bigWig
2
tsv
Organism
133
Homo sapiens
Biosample type
100
tissue
27
cell line
6
primary cell
Organ
868
epithelium
569
kidney
385
connective tissue
346
brain
294
musculature of body
254
pancreas
236
lung
225
vasculature
222
intestine
198
heart
192
limb
176
embryo
170
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
125
liver
108
extraembryonic component
96
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
127
AMP
6
ENCODE
Genome assembly (visualization)
129
hg19
10
GRCh38
annotation_type!
chromatin state
histone modifications
BIOSAMPLE
TYPE
133 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
eQTL
gene expression
tissue
large intestine
27
14
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
mucosa of rectum
4
2
+ See 7 more…
cell line
HT-29
2
2
1
1
HCT116
2
3
SW480
2
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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