Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
February, 2024
2
January, 2022
March, 2024
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
3
bigWig
Organism
136
Homo sapiens
Biosample type
100
tissue
30
cell line
6
primary cell
Organ
894
epithelium
573
kidney
410
connective tissue
393
brain
299
musculature of body
260
pancreas
239
lung
232
vasculature
227
intestine
204
heart
193
limb
190
bodily fluid
187
embryo
181
blood
175
blood vessel
167
skin of body
139
liver
136
large intestine
113
extraembryonic component
100
eye
93
stomach
79
adipose tissue
77
uterus
74
bone element
72
mammary gland
67
artery
64
prostate gland
64
small intestine
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
40
gonad
38
thymus
36
esophagus
35
spinal cord
27
spleen
21
nerve
21
testis
19
lymphatic vessel
18
lymphoid tissue
18
ovary
18
thyroid gland
17
vein
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
130
AMP
6
ENCODE
Genome assembly (visualization)
134
hg19
10
GRCh38
annotation_type!
chromatin state
month_released!
March, 2024
BIOSAMPLE
TYPE
136 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 5 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download