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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
57
target gene predictions
chromatin state
14
accessible chromatin
6
binding sites
5
histone modifications
3
variant allelic effects
2
eQTL
2
gene expression
Date released
91
September, 2022
64
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
February, 2024
3
January, 2020
3
May, 2020
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
185
bed bed3+
6
bigWig
2
tsv
Organism
189
Homo sapiens
Biosample type
153
tissue
30
cell line
6
primary cell
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
183
AMP
6
ENCODE
Genome assembly (visualization)
185
hg19
13
GRCh38
annotation_type!
chromatin state
organ_slims!
mammary gland
BIOSAMPLE
TYPE
189 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
large intestine
27
14
1
1
renal pelvis
19
9
2
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
left renal pelvis
6
2
1
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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