Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
24
target gene predictions
chromatin state
9
accessible chromatin
3
binding sites
3
eQTL
variant allelic effects
2
gene expression
1
histone modifications
Date released
42
September, 2022
30
February, 2021
5
June, 2020
3
January, 2020
3
January, 2022
2
March, 2024
2
November, 2021
1
March, 2020
1
May, 2021
1
October, 2022
Available data
85
bed bed3+
4
bigWig
2
tsv
Organism
90
Homo sapiens
Biosample type
80
tissue
6
cell line
4
primary cell
Organ
855
epithelium
559
kidney
396
connective tissue
377
brain
294
musculature of body
249
pancreas
239
lung
227
intestine
218
vasculature
194
heart
191
bodily fluid
187
embryo
186
limb
182
blood
168
skin of body
167
blood vessel
138
large intestine
135
liver
113
extraembryonic component
98
eye
93
stomach
79
uterus
76
adipose tissue
74
bone element
71
mammary gland
64
prostate gland
64
small intestine
63
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
48
ureter
42
gonad
38
thymus
36
esophagus
35
spinal cord
28
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
19
ovary
18
thyroid gland
17
vein
15
mouth
15
skeleton
13
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
88
AMP
2
ENCODE
Genome assembly (visualization)
85
hg19
8
GRCh38
annotation_type!
chromatin state
variant allelic effects
BIOSAMPLE
TYPE
90 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
eQTL
gene expression
histone modifications
tissue
renal pelvis
19
9
2
ovary
8
6
1
1
1
testis
7
3
1
1
1
1
1
left renal pelvis
6
2
1
right renal pelvis
6
2
1
cell line
NT2-D1 cell
1
1
1
2
NT2/D1
1
primary cell
luteal cell
1
1
Leydig cell
1
somatic gonadal cell
1
Download