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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
histone modifications
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
169
eQTL
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1750
February, 2021
1672
September, 2022
368
February, 2024
333
November, 2021
289
June, 2020
270
May, 2021
176
September, 2023
152
May, 2020
128
March, 2020
111
August, 2021
106
January, 2022
101
October, 2022
83
January, 2020
64
February, 2020
56
January, 2021
44
November, 2022
31
February, 2023
30
March, 2024
19
April, 2020
19
March, 2023
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4907
bed bed3+
740
tsv
544
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5813
Homo sapiens
Biosample type
2047
tissue
1910
primary cell
1567
cell line
332
in vitro differentiated cells
3
stem cell
Organ
776
epithelium
513
kidney
371
connective tissue
346
brain
293
musculature of body
236
lung
222
intestine
221
pancreas
207
vasculature
198
heart
192
limb
176
embryo
166
bodily fluid
158
blood
158
blood vessel
156
skin of body
133
large intestine
121
liver
108
extraembryonic component
96
eye
94
stomach
77
uterus
76
adipose tissue
68
bone element
67
mammary gland
64
small intestine
60
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphoid tissue
17
vein
16
lymphatic vessel
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5273
AMP
333
ENCODE
171
KPMP
60
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
5044
hg19
897
GRCh38
4
hg18
annotation_type!
differential activity
chromatin state
histone modifications
BIOSAMPLE
TYPE
5861 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
tissue
heart
37
20
5
1
3
2
stomach
40
21
3
1
1
kidney
29
14
10
1
7
1
1
brain
29
16
2
1
1
2
1
lung
33
17
1
1
+ See 218 more…
primary cell
monocyte
2
18
1
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
15
2
9
1
2
2
B cell
14
10
6
2
fibroblast
4
16
1
2
6
+ See 421 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
A549
21
19
1
2
K562
7
23
1
2
EndoC_BH1
1
8
1
8
1
+ See 643 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
neural progenitor cell
5
5
10
7
adipocyte
4
6
4
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 97 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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