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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
histone modifications
913
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
differential activity
140
variant allelic effects
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1748
February, 2021
838
September, 2022
289
June, 2020
222
November, 2021
199
February, 2024
171
September, 2023
134
May, 2020
131
May, 2021
111
August, 2021
105
January, 2022
101
October, 2022
84
March, 2020
82
January, 2020
64
February, 2020
49
May, 2022
44
November, 2022
35
August, 2017
31
February, 2023
30
March, 2024
28
January, 2021
19
April, 2020
19
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3590
bed bed3+
bed bed9
742
tsv
543
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4533
Homo sapiens
Biosample type
1573
primary cell
1554
tissue
1180
cell line
271
in vitro differentiated cells
1
stem cell
Organ
657
epithelium
438
kidney
302
connective tissue
276
brain
216
musculature of body
181
pancreas
177
vasculature
159
lung
154
heart
153
intestine
143
limb
134
blood vessel
113
skin of body
111
bodily fluid
105
blood
103
liver
93
embryo
92
large intestine
87
eye
72
extraembryonic component
65
adipose tissue
65
stomach
53
bone element
52
artery
49
mammary gland
43
prostate gland
42
small intestine
41
lymph node
38
adrenal gland
38
penis
38
ureter
37
placenta
30
gonad
28
esophagus
26
spinal cord
23
thymus
20
spleen
19
uterus
18
nerve
17
testis
14
vein
13
lymphatic vessel
13
thyroid gland
12
lymphoid tissue
12
ovary
12
skeleton
11
mouth
10
bronchus
8
breast
7
bone marrow
6
tongue
6
vagina
5
urinary bladder
3
trachea
2
nose
2
pituitary gland
1
pericardium
Project
4130
AMP
222
ENCODE
171
KPMP
32
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
3762
hg19
617
GRCh38
4
hg18
annotation_type!
differential activity
target gene predictions
histone modifications
files.file_type!
bed bed9
BIOSAMPLE
TYPE
4581 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
18
1
15
4
2
1
1
endothelial cell
15
2
9
1
2
2
common myeloid progenitor, CD34-positive
27
fibroblast
16
1
2
6
hepatocyte
1
8
1
13
2
+ See 418 more…
tissue
kidney
29
10
1
7
1
1
heart
37
5
1
3
2
stomach
40
3
1
1
islet of Langerhans
6
2
11
13
1
3
2
2
2
brain
29
2
1
1
2
1
+ See 215 more…
cell line
A549
21
1
2
EndoC_BH1
8
1
8
1
MCF-7
9
1
3
H1-hESC
1
1
2
8
K562
7
1
2
1
+ See 634 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
1
1
neural progenitor cell
5
10
7
adipocyte
4
4
1
1
4
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 89 more…
stem cell
H1-hESC
1
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