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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
eQTL
2
caQTL
Date released
196
February, 2021
151
September, 2022
127
November, 2021
93
September, 2023
74
February, 2024
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
11
February, 2023
9
March, 2023
8
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
545
bed bed3+
234
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
854
Homo sapiens
Biosample type
729
primary cell
59
tissue
40
cell line
26
in vitro differentiated cells
Organ
854
epithelium
592
kidney
437
brain
425
connective tissue
367
musculature of body
310
lung
286
intestine
249
heart
242
vasculature
239
limb
229
pancreas
216
bodily fluid
215
embryo
205
blood
201
skin of body
186
blood vessel
172
large intestine
145
extraembryonic component
144
liver
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
74
adipose tissue
72
adrenal gland
72
placenta
68
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
19
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
607
AMP
127
ENCODE
93
KPMP
20
T1D
7
LungMap
Genome assembly (visualization)
597
hg19
234
GRCh38
annotation_type!
differential activity
eQTL
BIOSAMPLE
TYPE
854 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 146 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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