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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
243
candidate regulatory elements
238
accessible chromatin
188
target gene predictions
121
chromatin state
differential activity
50
variant allelic effects
47
binding sites
33
histone modifications
5
eQTL
2
caQTL
Date released
349
September, 2022
300
February, 2021
128
November, 2021
96
September, 2023
76
February, 2024
35
August, 2021
34
May, 2021
33
June, 2020
27
May, 2020
20
January, 2020
20
January, 2021
15
November, 2022
11
February, 2023
10
February, 2020
9
March, 2020
9
March, 2023
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
798
bed bed3+
265
tsv
195
bigWig
118
bed bed9
90
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1211
Homo sapiens
Biosample type
750
primary cell
355
tissue
79
cell line
27
in vitro differentiated cells
Organ
857
epithelium
596
kidney
466
brain
444
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
960
AMP
128
ENCODE
96
KPMP
20
T1D
7
LungMap
Genome assembly (visualization)
919
hg19
320
GRCh38
annotation_type!
differential activity
BIOSAMPLE
TYPE
1211 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
2
1
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 154 more…
tissue
kidney
7
29
10
14
16
1
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 29 more…
cell line
EndoC_BH1
8
8
1
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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