Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
66
target gene predictions
60
candidate regulatory elements
48
binding sites
33
chromatin state
25
histone modifications
17
accessible chromatin
5
eQTL
3
gene expression
Date released
93
September, 2022
82
February, 2021
28
February, 2024
20
October, 2022
16
June, 2020
5
May, 2021
3
January, 2022
3
March, 2024
2
August, 2017
2
August, 2021
2
November, 2021
1
March, 2020
Available data
218
bed bed3+
31
bed bed9
3
tsv
1
bigWig
Organism
257
Homo sapiens
Biosample type
202
cell line
42
tissue
13
primary cell
Organ
857
epithelium
596
kidney
466
brain
446
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
255
AMP
2
ENCODE
Genome assembly (visualization)
251
hg19
64
GRCh38
annotation_type!
differential activity
organ_slims!
nerve
BIOSAMPLE
TYPE
257 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 25 more…
tissue
ovary
6
8
4
1
1
1
testis
3
7
1
3
1
1
1
1
blood
2
whole blood
1
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
luteal cell
1
1
Leydig cell
1
somatic gonadal cell
1
See all biosamples
Download