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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
chromatin state
913
accessible chromatin
binding sites
683
gene expression
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1869
February, 2021
1678
September, 2022
381
May, 2021
360
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
127
March, 2020
100
August, 2021
83
January, 2020
69
March, 2023
56
January, 2021
44
November, 2022
38
February, 2020
32
February, 2023
30
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
10
October, 2022
9
August, 2018
9
October, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5056
bed bed3+
873
tsv
544
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5972
Homo sapiens
Biosample type
2128
primary cell
1990
tissue
1508
cell line
388
in vitro differentiated cells
3
stem cell
Organ
850
epithelium
564
kidney
360
connective tissue
349
brain
287
musculature of body
240
pancreas
230
lung
221
intestine
206
vasculature
193
heart
187
limb
174
embryo
154
blood vessel
148
skin of body
143
bodily fluid
135
blood
130
large intestine
118
liver
109
extraembryonic component
94
stomach
93
eye
74
uterus
66
bone element
64
adipose tissue
63
small intestine
60
mammary gland
58
adrenal gland
56
artery
56
prostate gland
53
placenta
51
ureter
47
penis
42
lymph node
37
thymus
36
gonad
35
esophagus
31
spinal cord
26
spleen
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
17
lymphatic vessel
17
testis
15
skeleton
15
vein
14
mouth
12
bronchus
12
pituitary gland
10
breast
9
bone marrow
8
tongue
8
urinary bladder
7
vagina
3
nose
3
trachea
1
pericardium
Project
5315
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
2
ITG
Genome assembly (visualization)
5141
hg19
870
GRCh38
annotation_type!
eQTL
binding sites
chromatin state
BIOSAMPLE
TYPE
6019 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
gene expression
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
15
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
9
2
2
B cell
14
10
6
2
+ See 435 more…
tissue
heart
37
20
1
5
3
2
stomach
40
21
1
3
1
kidney
29
14
2
10
7
1
brain
29
16
3
2
1
1
lung
33
17
1
+ See 244 more…
cell line
HeLa-S3
5
55
H1-hESC
1
39
1
1
8
A549
21
19
1
1
K562
7
23
1
1
EndoC_BH1
1
1
8
8
3
1
+ See 628 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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