Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
65
target gene predictions
59
chromatin state
10
accessible chromatin
7
histone modifications
6
binding sites
eQTL
3
gene expression
Date released
164
September, 2022
70
February, 2021
10
June, 2020
6
May, 2021
4
August, 2017
3
February, 2024
3
March, 2024
2
March, 2020
1
October, 2022
Available data
205
bed bed3+
55
bed bed9
3
tsv
Organism
263
Homo sapiens
Biosample type
229
tissue
34
cell line
primary cell
Organ
402
brain
339
kidney
320
musculature of body
276
lung
263
intestine
238
limb
218
heart
207
bodily fluid
196
blood
193
embryo
166
large intestine
162
connective tissue
136
pancreas
128
epithelium
107
stomach
105
extraembryonic component
101
skin of body
91
vasculature
85
eye
85
liver
84
blood vessel
79
small intestine
77
uterus
75
adipose tissue
75
bone element
67
prostate gland
64
ureter
62
lymph node
62
placenta
61
adrenal gland
48
thymus
44
gonad
41
artery
41
mammary gland
37
spinal cord
33
spleen
32
esophagus
24
lymphoid tissue
24
testis
23
nerve
23
penis
20
ovary
19
thyroid gland
18
skeleton
14
mouth
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
4
lymphatic vessel
4
nose
3
vein
Project
263
AMP
Genome assembly (visualization)
260
hg19
57
GRCh38
annotation_type!
eQTL
biosample_type!
primary cell
BIOSAMPLE
TYPE
263 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
gene expression
tissue
small intestine
29
17
15
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
Peyer's patch
7
3
3
1
+ See 14 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
See all biosamples
Download