Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
60
target gene predictions
49
candidate regulatory elements
46
binding sites
28
chromatin state
25
histone modifications
14
accessible chromatin
2
variant allelic effects
Date released
78
September, 2022
75
February, 2021
30
February, 2024
19
October, 2022
12
June, 2020
4
May, 2021
4
November, 2021
2
August, 2017
Available data
198
bed bed3+
26
bed bed9
2
bigWig
Organism
224
Homo sapiens
Biosample type
205
cell line
tissue
19
primary cell
Organ
887
epithelium
359
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
67
bone element
67
musculature of body
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
stomach
10
esophagus
10
gonad
10
pituitary gland
8
limb
8
mouth
7
spinal cord
7
testis
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
220
AMP
4
ENCODE
Genome assembly (visualization)
224
hg19
58
GRCh38
annotation_type!
eQTL
biosample_type!
tissue
BIOSAMPLE
TYPE
224 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
variant allelic effects
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 26 more…
primary cell
epithelial cell of esophagus
1
2
1
2
peripheral blood mononuclear cell
4
1
1
smooth muscle cell of the esophagus
2
2
peripheral blood stem cell
1
1
1
See all biosamples
Download