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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
bigWig
2
tsv
Organism
169
Homo sapiens
Biosample type
132
tissue
34
cell line
3
primary cell
Organ
770
epithelium
612
kidney
416
brain
384
connective tissue
352
musculature of body
301
lung
275
intestine
229
vasculature
227
heart
225
limb
216
bodily fluid
213
embryo
205
blood
205
pancreas
196
skin of body
175
blood vessel
169
large intestine
142
extraembryonic component
125
liver
113
stomach
84
mammary gland
81
small intestine
81
uterus
79
bone element
77
prostate gland
72
eye
71
adipose tissue
70
placenta
66
adrenal gland
64
penis
62
lymph node
61
artery
61
ureter
48
thymus
46
gonad
41
spinal cord
40
esophagus
32
spleen
24
lymphoid tissue
24
testis
22
vein
21
nerve
21
ovary
21
thyroid gland
18
lymphatic vessel
18
mouth
14
bronchus
12
breast
12
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
166
AMP
3
ENCODE
Genome assembly (visualization)
167
hg19
38
GRCh38
annotation_type!
eQTL
files.file_type!
bigWig
BIOSAMPLE
TYPE
169 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
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