Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
candidate regulatory elements
36
target gene predictions
33
chromatin state
9
accessible chromatin
5
histone modifications
3
binding sites
eQTL
Date released
99
September, 2022
33
February, 2021
6
June, 2020
3
May, 2021
3
November, 2021
1
October, 2022
Available data
112
bed bed3+
33
bed bed9
3
bigWig
Organism
145
Homo sapiens
Biosample type
97
tissue
40
primary cell
5
in vitro differentiated cells
3
cell line
Organ
940
epithelium
645
kidney
430
connective tissue
399
brain
359
musculature of body
309
lung
284
intestine
253
pancreas
248
vasculature
234
heart
230
limb
216
bodily fluid
214
embryo
205
blood
201
skin of body
186
blood vessel
171
large intestine
145
extraembryonic component
138
liver
117
stomach
108
eye
89
bone element
87
mammary gland
82
small intestine
82
uterus
77
prostate gland
72
placenta
71
adrenal gland
68
adipose tissue
64
artery
64
penis
64
ureter
62
lymph node
48
thymus
46
gonad
41
esophagus
38
spinal cord
32
spleen
24
lymphoid tissue
24
testis
22
thyroid gland
22
vein
21
lymphatic vessel
21
ovary
20
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
142
AMP
3
ENCODE
Genome assembly (visualization)
145
hg19
36
GRCh38
annotation_type!
eQTL
month_released!
March, 2020
BIOSAMPLE
TYPE
145 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
tissue
placenta
26
15
14
1
2
1
chorionic villus
8
4
4
chorion membrane
3
3
3
1
umbilical cord
2
1
1
1
1
amnion
2
1
1
+ See 1 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
epithelial cell of amnion
1
1
1
+ See 5 more…
in vitro differentiated cells
trophoblast cell
2
2
1
cell line
HTR-8/Svneo
1
1
1
See all biosamples
Download