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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
907
accessible chromatin
839
candidate regulatory elements
817
binding sites
683
gene expression
523
target gene predictions
eQTL
167
differential activity
140
variant allelic effects
111
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
pQTL
1
representative DNase hypersensitivity sites
Date released
2587
February, 2021
September, 2022
386
May, 2021
371
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
March, 2020
101
October, 2022
98
August, 2021
89
January, 2020
69
March, 2023
56
January, 2021
49
May, 2022
44
November, 2022
38
February, 2020
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4233
bed bed3+
873
tsv
542
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
5219
Homo sapiens
Biosample type
1938
primary cell
1800
cell line
1157
tissue
365
in vitro differentiated cells
4
stem cell
Organ
795
epithelium
423
kidney
317
connective tissue
257
brain
218
pancreas
185
vasculature
164
musculature of body
141
heart
140
bodily fluid
138
blood vessel
136
blood
134
embryo
122
intestine
102
liver
101
limb
100
lung
99
skin of body
81
eye
74
large intestine
70
uterus
52
adipose tissue
49
artery
49
stomach
47
bone element
46
extraembryonic component
45
mammary gland
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
26
small intestine
25
ureter
24
placenta
23
gonad
21
esophagus
17
spinal cord
17
vein
16
thymus
15
lymphatic vessel
15
spleen
14
nerve
12
pituitary gland
12
testis
10
bone marrow
10
bronchus
10
ovary
10
thyroid gland
9
lymphoid tissue
9
skeleton
6
breast
6
mouth
5
trachea
4
tongue
4
urinary bladder
3
vagina
1
nose
1
pericardium
Project
4564
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
Genome assembly (visualization)
4387
hg19
906
GRCh38
1
hg18
annotation_type!
eQTL
pQTL
month_released!
September, 2022
BIOSAMPLE
TYPE
5266 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
6
+ See 435 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
1
2
17
1
breast cancer cell
11
9
+ See 745 more…
tissue
kidney
2
10
15
1
7
1
2
heart
1
5
18
1
3
1
2
2
islet of Langerhans
1
5
2
11
1
1
3
2
2
2
retina
1
23
3
1
1
1
stomach
1
3
21
1
2
+ See 245 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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