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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
77
accessible chromatin
67
candidate regulatory elements
50
binding sites
49
gene expression
42
chromatin state
33
differential activity
30
histone modifications
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
113
September, 2022
100
February, 2021
52
February, 2024
46
March, 2023
37
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
16
June, 2020
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
2
November, 2019
1
April, 2019
1
August, 2021
1
February, 2020
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
339
bed bed3+
76
tsv
57
bigWig
36
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
467
Homo sapiens
Biosample type
229
cell line
135
primary cell
100
tissue
3
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
427
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
380
hg19
107
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
467 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
gene expression
chromatin state
differential activity
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
K562
23
1
7
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
2
1
1
2
1
1
+ See 29 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
2
11
3
1
1
2
2
2
body of pancreas
5
8
2
4
1
3
pancreas
5
5
5
1
3
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 7 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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