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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
79
target gene predictions
74
chromatin state
50
histone modifications
44
accessible chromatin
36
Fine-mapped variants
eQTL
19
gene expression
18
binding sites
17
variant allelic effects
Date released
183
September, 2022
115
February, 2021
38
March, 2020
29
January, 2020
21
June, 2020
20
May, 2020
11
May, 2021
6
August, 2017
6
February, 2020
6
October, 2022
4
May, 2019
3
September, 2023
2
January, 2021
1
February, 2024
1
January, 2022
1
March, 2024
1
May, 2022
1
November, 2019
1
November, 2021
Available data
320
bed bed3+
67
bed bed9
55
tsv
23
bigWig
6
bigBed bed9
1
bed bed9+
Organism
450
Homo sapiens
Biosample type
320
tissue
77
cell line
48
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
447
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
424
hg19
125
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
450 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
gene expression
binding sites
variant allelic effects
tissue
brain
29
16
18
3
2
1
1
1
caudate nucleus
5
3
4
1
2
3
1
1
layer of hippocampus
6
3
4
1
1
substantia nigra
5
2
3
1
3
1
cerebellum
3
2
2
1
1
3
2
+ See 55 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 9 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 9 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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