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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
eQTL
2
caQTL
Date released
151
September, 2022
127
November, 2021
111
February, 2021
62
September, 2023
58
February, 2024
29
March, 2023
25
June, 2020
20
January, 2021
17
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
August, 2021
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
November, 2019
Available data
545
bed bed3+
167
bigWig
90
tsv
50
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
693
Homo sapiens
Biosample type
583
primary cell
57
tissue
35
cell line
18
in vitro differentiated cells
Organ
693
epithelium
446
kidney
418
brain
390
connective tissue
357
musculature of body
309
lung
283
intestine
234
limb
228
heart
224
vasculature
215
bodily fluid
214
pancreas
205
embryo
204
blood
199
skin of body
173
blood vessel
170
large intestine
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
64
penis
64
ureter
63
adipose tissue
62
artery
62
lymph node
49
thymus
45
gonad
40
esophagus
40
spinal cord
32
spleen
23
lymphoid tissue
23
testis
22
vein
21
nerve
21
ovary
21
thyroid gland
18
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
475
AMP
127
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
596
hg19
225
GRCh38
annotation_type!
eQTL
gene expression
BIOSAMPLE
TYPE
693 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell
15
7
2
2
1
2
endothelial cell of umbilical vein
2
4
6
5
2
1
hepatocyte
8
3
1
1
1
2
4
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 128 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 11 more…
cell line
EndoC_BH1
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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