Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
260
gene expression
222
accessible chromatin
138
target gene predictions
122
candidate regulatory elements
93
differential activity
71
chromatin state
47
binding sites
47
variant allelic effects
31
histone modifications
9
Fine-mapped variants
eQTL
5
caQTL
Date released
215
February, 2021
187
September, 2022
155
September, 2023
127
November, 2021
75
February, 2024
38
March, 2023
36
May, 2021
27
June, 2020
24
August, 2021
22
May, 2020
21
January, 2020
20
January, 2021
17
March, 2020
16
February, 2023
15
November, 2022
9
February, 2020
7
April, 2020
7
October, 2019
7
October, 2022
6
August, 2018
4
November, 2019
3
August, 2017
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
609
bed bed3+
340
tsv
185
bigWig
78
txt
68
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1045
Homo sapiens
Biosample type
835
primary cell
137
tissue
47
cell line
26
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
734
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
685
hg19
272
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
1045 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 150 more…
tissue
pigmented layer of retina
20
coronary artery
1
3
3
3
3
2
3
1
tibial artery
1
3
2
3
3
2
3
ascending aorta
1
1
2
4
3
1
3
aorta
1
4
4
4
+ See 21 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
See all biosamples
Download