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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
251
accessible chromatin
207
candidate regulatory elements
196
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
eQTL
2
caQTL
Date released
325
September, 2022
302
February, 2021
158
September, 2023
127
November, 2021
75
February, 2024
45
June, 2020
45
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
23
August, 2021
20
January, 2021
15
November, 2022
14
February, 2020
12
February, 2023
11
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
January, 2022
1
July, 2020
Available data
840
bed bed3+
379
tsv
195
bigWig
114
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1367
Homo sapiens
Biosample type
840
primary cell
379
tissue
117
cell line
30
in vitro differentiated cells
1
stem cell
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
1056
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
992
hg19
353
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
1367 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
2
hepatocyte
13
8
1
3
1
4
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 152 more…
tissue
brain
1
2
29
16
18
3
1
1
caudate nucleus
1
2
5
3
4
1
1
3
pigmented layer of retina
20
layer of hippocampus
6
3
4
1
1
substantia nigra
1
5
2
3
1
3
+ See 73 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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