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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
accessible chromatin
56
gene expression
52
target gene predictions
35
differential activity
34
candidate regulatory elements
25
chromatin state
eQTL
15
variant allelic effects
11
Fine-mapped variants
11
binding sites
11
histone modifications
2
caQTL
2
sQTL
2
variant to gene
Date released
65
September, 2022
46
March, 2023
45
February, 2021
35
May, 2021
24
February, 2024
20
January, 2021
18
November, 2021
15
March, 2020
11
May, 2020
8
January, 2020
7
August, 2018
7
June, 2020
6
October, 2019
5
September, 2023
4
February, 2023
4
November, 2019
3
August, 2017
3
February, 2020
1
April, 2019
1
August, 2021
1
January, 2018
1
June, 2021
1
May, 2019
1
October, 2022
Available data
204
bed bed3+
89
tsv
66
bigWig
21
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
332
Homo sapiens
Biosample type
155
primary cell
136
tissue
38
cell line
3
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
287
AMP
20
T1D
18
ENCODE
5
KPMP
2
community
Genome assembly (visualization)
234
hg19
79
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
332 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
caQTL
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 18 more…
tissue
islet of Langerhans
6
11
1
3
1
2
2
1
2
2
body of pancreas
2
5
8
4
1
3
pancreas
5
5
5
3
1
1
1
coronary artery
3
1
3
3
3
2
3
1
tibial artery
3
1
2
3
3
2
3
+ See 9 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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