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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
68
accessible chromatin
50
gene expression
33
candidate regulatory elements
33
differential activity
21
chromatin state
eQTL
11
variant allelic effects
9
binding sites
8
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
75
February, 2024
56
September, 2022
46
March, 2023
40
February, 2021
35
May, 2021
20
January, 2021
20
November, 2021
9
March, 2020
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
March, 2024
2
November, 2019
1
April, 2019
1
August, 2021
1
February, 2020
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
234
bed bed3+
77
tsv
58
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
344
Homo sapiens
Biosample type
131
primary cell
111
tissue
99
cell line
3
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
302
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
256
hg19
113
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
344 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
11
3
1
2
1
2
2
2
body of pancreas
5
2
8
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
uterus
2
1
1
3
1
+ See 10 more…
cell line
HeLa-S3
55
5
3
1
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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