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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1650
candidate regulatory elements
1342
target gene predictions
976
histone modifications
chromatin state
910
accessible chromatin
816
binding sites
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2402
February, 2021
1654
September, 2022
332
November, 2021
299
February, 2024
293
May, 2021
287
June, 2020
151
May, 2020
116
March, 2020
115
September, 2023
106
January, 2022
101
October, 2022
79
August, 2021
66
January, 2020
57
March, 2023
56
January, 2021
44
November, 2022
32
February, 2023
26
February, 2020
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
3
September, 2018
2
May, 2024
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5842
bed bed3+
534
bigWig
260
tsv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6235
Homo sapiens
Biosample type
2140
cell line
1994
tissue
1795
primary cell
349
in vitro differentiated cells
3
stem cell
Organ
643
epithelium
375
brain
373
kidney
363
connective tissue
290
musculature of body
239
lung
227
intestine
212
pancreas
197
vasculature
190
bodily fluid
189
limb
183
heart
181
blood
177
embryo
167
skin of body
151
blood vessel
136
large intestine
115
liver
113
extraembryonic component
99
eye
93
stomach
77
uterus
72
mammary gland
70
bone element
66
adipose tissue
64
prostate gland
64
small intestine
59
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
40
gonad
thymus
36
esophagus
34
spinal cord
27
spleen
21
testis
19
nerve
18
lymphoid tissue
18
ovary
18
thyroid gland
17
vein
16
lymphatic vessel
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
nose
Project
5746
AMP
332
ENCODE
110
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5967
hg19
992
GRCh38
4
hg18
annotation_type!
gene expression
chromatin state
organ_slims!
thymus
nose
BIOSAMPLE
TYPE
6283 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
+ See 760 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
2
1
lung
33
17
1
+ See 233 more…
primary cell
monocyte
2
86
18
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
1
2
2
+ See 396 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 105 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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