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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
553
accessible chromatin
gene expression
440
target gene predictions
407
candidate regulatory elements
304
histone modifications
242
chromatin state
152
differential activity
138
binding sites
88
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
592
September, 2022
497
February, 2021
333
November, 2021
215
May, 2021
115
September, 2023
110
February, 2024
93
May, 2020
74
June, 2020
56
January, 2021
42
March, 2023
41
August, 2021
40
January, 2022
40
May, 2022
31
October, 2022
27
November, 2022
26
January, 2020
19
April, 2020
11
August, 2017
11
March, 2020
9
October, 2019
5
February, 2023
3
November, 2019
2
November, 2020
1
June, 2021
Available data
1948
bed bed3+
413
bigWig
204
bed bed9
153
tsv
27
bed bed9+
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2347
Homo sapiens
Biosample type
tissue
cell line
1991
primary cell
396
in vitro differentiated cells
4
stem cell
Organ
602
epithelium
299
connective tissue
141
vasculature
121
kidney
109
skin of body
102
pancreas
95
blood vessel
51
embryo
49
mammary gland
48
liver
47
penis
46
musculature of body
45
extraembryonic component
39
brain
34
lung
29
eye
27
heart
24
artery
23
intestine
20
vein
16
bronchus
16
lymphatic vessel
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
testis
1
thymus
Project
1871
AMP
333
ENCODE
110
KPMP
60
T1D
19
LungMap
Genome assembly (visualization)
2184
hg19
763
GRCh38
annotation_type!
gene expression
biosample_type!
tissue
cell line
BIOSAMPLE
TYPE
2393 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
30
1
B cell
6
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 400 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
10
19
1
10
1
neural progenitor cell
10
5
5
15
4
adipocyte
4
6
4
1
6
1
embryonic stem cell
6
1
1
5
1
mesenchymal stem cell
1
3
3
1
2
1
+ See 106 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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