Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
target gene predictions
9
candidate regulatory elements
4
binding sites
4
chromatin state
2
accessible chromatin
gene expression
2
histone modifications
1
eQTL
Date released
51
February, 2024
12
September, 2022
10
February, 2021
2
June, 2020
2
May, 2021
1
January, 2022
1
November, 2021
1
October, 2022
Available data
76
bed bed3+
4
bed bed9
bigWig
Organism
80
Homo sapiens
Biosample type
65
cell line
11
tissue
4
primary cell
Organ
529
epithelium
426
brain
414
kidney
356
connective tissue
348
musculature of body
301
lung
275
intestine
225
limb
217
bodily fluid
212
heart
206
blood
203
embryo
203
vasculature
197
skin of body
172
pancreas
169
large intestine
160
blood vessel
143
extraembryonic component
118
liver
112
stomach
84
mammary gland
82
small intestine
80
uterus
77
prostate gland
75
bone element
72
eye
71
adipose tissue
71
placenta
66
adrenal gland
64
penis
62
lymph node
61
ureter
58
artery
48
thymus
47
gonad
42
spinal cord
41
esophagus
32
spleen
25
testis
23
lymphoid tissue
21
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
15
lymphatic vessel
14
bronchus
12
breast
12
pituitary gland
11
bone marrow
10
skeleton
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
79
AMP
1
ENCODE
Genome assembly (visualization)
79
hg19
57
GRCh38
annotation_type!
gene expression
files.file_type!
bigWig
BIOSAMPLE
TYPE
80 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
histone modifications
eQTL
cell line
HeLa-S3
55
5
1
3
Ishikawa
1
tissue
uterus
2
3
1
1
1
endometrium cancer
1
1
endometrium
1
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
Download