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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
117
accessible chromatin
100
candidate regulatory elements
63
target gene predictions
53
chromatin state
43
binding sites
41
variant allelic effects
28
differential activity
28
histone modifications
3
eQTL
2
caQTL
Date released
151
September, 2022
111
February, 2021
60
February, 2024
27
March, 2023
25
June, 2020
17
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
August, 2021
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
393
bed bed3+
72
bigWig
50
bed bed9
28
tsv
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
478
Homo sapiens
Biosample type
368
primary cell
59
tissue
33
cell line
18
in vitro differentiated cells
Organ
478
epithelium
447
brain
391
kidney
353
musculature of body
344
connective tissue
298
lung
267
intestine
239
limb
224
heart
217
bodily fluid
207
vasculature
206
blood
203
embryo
192
skin of body
189
pancreas
166
blood vessel
166
large intestine
143
extraembryonic component
127
liver
108
stomach
104
eye
82
bone element
81
mammary gland
80
small intestine
79
uterus
77
prostate gland
76
adipose tissue
71
placenta
65
artery
64
penis
64
ureter
62
adrenal gland
62
lymph node
48
thymus
46
gonad
42
spinal cord
39
esophagus
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
vein
20
ovary
20
thyroid gland
18
mouth
18
skeleton
13
bronchus
12
breast
12
lymphatic vessel
12
pituitary gland
10
bone marrow
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
478
AMP
127
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
445
hg19
98
GRCh38
annotation_type!
gene expression
BIOSAMPLE
TYPE
478 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
endothelial cell of umbilical vein
2
6
4
5
2
1
foreskin keratinocyte
11
4
4
hepatocyte
7
1
2
1
1
2
4
keratinocyte
3
3
3
1
1
2
bronchial epithelial cell
1
4
2
2
2
1
+ See 66 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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