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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
64
target gene predictions
50
chromatin state
20
accessible chromatin
9
histone modifications
7
binding sites
gene expression
3
variant allelic effects
2
eQTL
Date released
140
September, 2022
64
February, 2021
16
November, 2021
10
June, 2020
6
February, 2024
6
May, 2021
3
August, 2017
2
January, 2022
2
March, 2020
1
May, 2020
1
October, 2022
Available data
202
bed bed3+
47
bed bed9
10
bigWig
Organism
251
Homo sapiens
Biosample type
197
tissue
34
cell line
20
primary cell
Organ
706
epithelium
450
kidney
447
brain
419
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
236
heart
233
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
134
liver
117
stomach
108
eye
87
mammary gland
85
bone element
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
235
AMP
16
ENCODE
Genome assembly (visualization)
249
hg19
67
GRCh38
annotation_type!
gene expression
organ_slims!
tongue
small intestine
BIOSAMPLE
TYPE
251 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
variant allelic effects
eQTL
tissue
large intestine
27
14
13
1
1
thymus
20
14
11
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
paneth cell
1
1
fetal thymocyte
1
+ See 1 more…
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