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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
39
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
33
bed bed9
3
bigWig
Organism
167
Homo sapiens
Biosample type
129
tissue
32
cell line
6
primary cell
Organ
679
epithelium
450
kidney
436
brain
398
connective tissue
358
musculature of body
306
lung
280
intestine
236
limb
231
heart
227
vasculature
214
pancreas
213
bodily fluid
202
blood
200
embryo
197
skin of body
176
blood vessel
167
large intestine
143
extraembryonic component
129
liver
115
stomach
108
eye
85
bone element
85
mammary gland
83
small intestine
79
uterus
75
prostate gland
73
adipose tissue
72
placenta
70
adrenal gland
65
artery
64
ureter
63
penis
61
lymph node
48
thymus
47
gonad
43
esophagus
41
spinal cord
32
spleen
25
testis
23
lymphoid tissue
23
nerve
21
ovary
21
thyroid gland
21
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
11
breast
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
2
pituitary gland
Project
161
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
43
GRCh38
annotation_type!
gene expression
month_released!
May, 2021
BIOSAMPLE
TYPE
167 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
13
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
4
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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