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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
246
candidate regulatory elements
239
accessible chromatin
202
target gene predictions
127
chromatin state
93
differential activity
50
binding sites
48
variant allelic effects
35
histone modifications
10
eQTL
6
Fine-mapped variants
4
caQTL
Date released
355
September, 2022
203
February, 2021
138
November, 2021
70
February, 2024
62
September, 2023
31
June, 2020
29
March, 2023
23
May, 2021
20
January, 2021
20
May, 2020
19
January, 2020
15
November, 2022
12
August, 2021
12
February, 2023
11
March, 2020
9
October, 2022
7
April, 2020
6
August, 2017
6
October, 2019
5
May, 2022
3
February, 2020
2
May, 2019
1
January, 2022
1
November, 2019
Available data
828
bed bed3+
183
bigWig
121
bed bed9
99
tsv
14
bigBed narrowPeak
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1060
Homo sapiens
Biosample type
628
primary cell
360
tissue
52
cell line
20
in vitro differentiated cells
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
831
AMP
138
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
961
hg19
321
GRCh38
annotation_type!
gene expression
BIOSAMPLE
TYPE
1060 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
endothelial cell of umbilical vein
6
2
4
5
2
1
hepatocyte
1
8
3
1
1
2
4
foreskin keratinocyte
11
4
4
keratinocyte
3
2
5
3
1
1
2
+ See 137 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
pigmented layer of retina
20
psoas muscle
7
1
8
4
+ See 34 more…
cell line
EndoC_BH1
8
1
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 1 more…
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