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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
chromatin state
913
accessible chromatin
binding sites
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1872
February, 2021
1678
September, 2022
379
May, 2021
367
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
127
August, 2021
127
March, 2020
106
January, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
30
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
10
October, 2022
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5063
bed bed3+
898
tsv
544
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6135
Homo sapiens
Biosample type
2167
primary cell
2105
tissue
1518
cell line
388
in vitro differentiated cells
3
stem cell
Organ
853
epithelium
568
kidney
379
connective tissue
378
brain
294
musculature of body
255
pancreas
231
lung
224
intestine
212
vasculature
199
heart
192
limb
174
embryo
160
blood vessel
151
skin of body
145
bodily fluid
137
blood
132
large intestine
126
liver
110
extraembryonic component
95
stomach
94
eye
77
adipose tissue
75
uterus
66
bone element
64
small intestine
61
artery
60
mammary gland
59
adrenal gland
57
prostate gland
54
placenta
51
ureter
47
penis
42
lymph node
39
gonad
38
esophagus
37
thymus
33
spinal cord
27
spleen
21
nerve
19
lymphoid tissue
19
ovary
19
testis
19
thyroid gland
17
lymphatic vessel
15
mouth
15
skeleton
15
vein
13
pituitary gland
12
bronchus
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5476
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5199
hg19
996
GRCh38
3
hg18
annotation_type!
hQTL
binding sites
chromatin state
BIOSAMPLE
TYPE
6183 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
15
4
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
9
1
2
2
B cell
14
10
6
2
+ See 440 more…
tissue
heart
37
20
1
5
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
7
1
1
brain
29
16
3
2
1
2
1
lung
33
17
1
1
+ See 254 more…
cell line
HeLa-S3
5
55
H1-hESC
1
39
1
1
8
A549
21
19
1
1
K562
7
23
1
1
EndoC_BH1
1
1
8
8
3
1
+ See 629 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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