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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
accessible chromatin
candidate regulatory elements
9
chromatin state
9
target gene predictions
6
binding sites
4
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Date released
24
February, 2023
22
November, 2022
18
September, 2022
8
February, 2021
6
June, 2020
4
November, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
October, 2022
1
February, 2024
Available data
80
bed bed3+
36
bigWig
9
bed bed9
2
tsv
Organism
91
Homo sapiens
Biosample type
60
tissue
17
primary cell
8
cell line
6
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
87
AMP
4
ENCODE
Genome assembly (visualization)
89
hg19
16
GRCh38
annotation_type!
hQTL
candidate regulatory elements
representative DNase hypersensitivity sites
BIOSAMPLE
TYPE
91 results
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accessible chromatin
chromatin state
target gene predictions
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
retina
23
3
3
1
1
1
1
1
pigmented layer of retina
20
eye
1
2
2
corneal epithelium
1
primary cell
retinal pigment epithelial cell
3
1
1
2
1
iris pigment epithelial cell
1
1
1
Muller cell
2
fibroblast of the conjunctiva
1
1
retinal pigment epithelial cell
1
+ See 1 more…
cell line
WERI-Rb-1
1
1
1
2
1
fibroblast of the conjunctiva
1
retinal cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
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