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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
80
target gene predictions
74
chromatin state
27
accessible chromatin
11
gene expression
7
binding sites
7
eQTL
7
histone modifications
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
136
September, 2022
15
February, 2024
14
February, 2021
11
November, 2021
9
March, 2020
6
February, 2020
6
June, 2020
6
May, 2021
5
January, 2020
5
May, 2020
3
August, 2017
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
October, 2019
Available data
135
bed bed3+
71
bed bed9
16
bigWig
14
tsv
3
bigBed bed9
Organism
229
Homo sapiens
Biosample type
171
tissue
46
primary cell
11
cell line
1
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
218
AMP
11
ENCODE
Genome assembly (visualization)
221
hg19
96
GRCh38
annotation_type!
hQTL
candidate regulatory elements
representative DNase hypersensitivity sites
BIOSAMPLE
TYPE
229 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
16
16
1
1
muscle of leg
14
15
2
muscle of back
13
13
psoas muscle
8
4
1
gastrocnemius medialis
5
4
1
+ See 16 more…
primary cell
skeletal muscle satellite cell
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
skeletal muscle cell
1
1
1
1
+ See 4 more…
cell line
LHCN-M2
1
1
1
1
1
A673
2
1
SJCRH30
1
1
1
in vitro differentiated cells
myotube
1
See all biosamples
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