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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
candidate regulatory elements
180
target gene predictions
117
chromatin state
54
accessible chromatin
28
binding sites
25
gene expression
24
histone modifications
7
eQTL
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
327
September, 2022
181
February, 2021
66
February, 2024
21
June, 2020
14
November, 2021
13
May, 2021
10
March, 2020
9
August, 2021
6
February, 2020
6
May, 2020
5
January, 2020
5
October, 2022
4
August, 2017
4
May, 2022
2
January, 2021
2
March, 2024
2
May, 2019
1
January, 2022
1
October, 2019
Available data
529
bed bed3+
112
bed bed9
28
bigWig
28
tsv
3
bigBed bed9
1
bed bed9+
Organism
679
Homo sapiens
Biosample type
363
tissue
197
cell line
86
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
663
AMP
14
ENCODE
2
T1D
Genome assembly (visualization)
657
hg19
199
GRCh38
annotation_type!
hQTL
BIOSAMPLE
TYPE
679 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 36 more…
cell line
H1-hESC
1
39
1
1
2
8
1
H9
7
8
1
LHCN-M2
2
1
1
1
1
1
MG63
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 28 more…
primary cell
trophoblast cell
7
5
4
1
1
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 14 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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