Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
479
accessible chromatin
478
gene expression
372
target gene predictions
328
candidate regulatory elements
histone modifications
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
364
February, 2021
333
November, 2021
326
September, 2022
281
September, 2023
152
February, 2024
142
May, 2021
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
39
August, 2021
37
January, 2022
31
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
13
May, 2022
9
August, 2018
9
November, 2022
5
March, 2020
October, 2019
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1374
bed bed3+
591
tsv
405
bigWig
108
txt
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2014
Homo sapiens
Biosample type
2059
primary cell
2050
tissue
1577
cell line
330
in vitro differentiated cells
3
stem cell
Organ
750
epithelium
300
kidney
244
connective tissue
149
vasculature
118
pancreas
99
blood vessel
78
skin of body
56
liver
44
musculature of body
37
mammary gland
33
penis
31
brain
30
extraembryonic component
29
lung
27
heart
24
artery
22
intestine
19
eye
17
embryo
15
lymphatic vessel
15
vein
13
bronchus
11
adrenal gland
11
stomach
9
bone element
9
bone marrow
9
esophagus
8
placenta
8
prostate gland
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
small intestine
4
uterus
3
mouth
3
spinal cord
3
thyroid gland
3
trachea
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1365
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1391
hg19
450
GRCh38
annotation_type!
histone modifications
chromatin state
month_released!
October, 2019
BIOSAMPLE
TYPE
2059 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
endothelial cell
15
9
7
2
2
1
2
B cell
6
2
10
14
fibroblast
16
4
1
6
2
+ See 423 more…
See all biosamples
Download