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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1541
candidate regulatory elements
1273
target gene predictions
histone modifications
887
accessible chromatin
chromatin state
808
binding sites
678
gene expression
167
differential activity
165
eQTL
137
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1676
February, 2021
1547
September, 2022
367
February, 2024
312
November, 2021
286
September, 2023
275
June, 2020
263
May, 2021
152
May, 2020
125
March, 2020
111
August, 2021
100
January, 2022
99
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
25
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4655
bed bed3+
895
tsv
532
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5719
Homo sapiens
Biosample type
2038
primary cell
1848
tissue
1544
cell line
332
in vitro differentiated cells
3
stem cell
Organ
868
epithelium
569
kidney
387
connective tissue
346
brain
294
musculature of body
254
pancreas
236
lung
225
vasculature
intestine
198
heart
192
limb
176
embryo
170
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
125
liver
108
extraembryonic component
96
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5079
AMP
312
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4792
hg19
868
GRCh38
4
hg18
annotation_type!
histone modifications
chromatin state
organ_slims!
gonad
intestine
BIOSAMPLE
TYPE
5767 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
18
1
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
15
2
9
1
2
2
B cell
14
10
6
2
fibroblast
4
16
1
2
6
+ See 414 more…
tissue
heart
37
20
5
1
3
2
stomach
40
21
3
1
1
kidney
29
14
10
1
7
1
1
brain
29
16
2
1
1
2
1
lung
33
17
1
1
+ See 200 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
A549
21
19
1
2
K562
7
23
1
2
EndoC_BH1
1
8
1
8
3
1
+ See 633 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
neural progenitor cell
5
5
10
7
adipocyte
4
6
4
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 97 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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