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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1630
candidate regulatory elements
1302
target gene predictions
histone modifications
chromatin state
843
accessible chromatin
809
binding sites
633
gene expression
153
eQTL
134
differential activity
129
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
1714
February, 2021
1625
September, 2022
348
February, 2024
313
November, 2021
286
September, 2023
281
June, 2020
236
May, 2021
146
May, 2020
118
March, 2020
103
August, 2021
100
October, 2022
99
January, 2022
79
January, 2020
62
February, 2020
44
November, 2022
36
January, 2021
31
February, 2023
28
March, 2024
23
March, 2023
19
April, 2020
15
May, 2022
11
November, 2019
3
November, 2020
3
October, 2019
3
September, 2018
2
August, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
4722
bed bed3+
822
tsv
486
bigWig
108
txt
21
csv
2
bigBed narrowPeak
Organism
5687
Homo sapiens
Biosample type
1937
primary cell
1923
tissue
1541
cell line
329
in vitro differentiated cells
3
stem cell
Organ
868
epithelium
569
kidney
387
connective tissue
346
brain
294
musculature of body
pancreas
236
lung
225
vasculature
222
intestine
198
heart
192
limb
176
embryo
170
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
125
liver
108
extraembryonic component
96
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5068
AMP
313
ENCODE
281
KPMP
40
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4845
hg19
844
GRCh38
4
hg18
annotation_type!
histone modifications
chromatin state
organ_slims!
gonad
pancreas
BIOSAMPLE
TYPE
5735 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
2
18
1
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
15
2
9
1
2
2
B cell
14
10
6
2
fibroblast
4
16
1
2
6
+ See 403 more…
tissue
heart
37
20
5
1
3
2
stomach
40
21
3
1
1
kidney
29
14
10
1
7
1
1
brain
29
16
2
1
1
2
1
lung
33
17
1
1
+ See 207 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
A549
21
19
1
2
K562
7
23
1
2
HFFc6
19
+ See 637 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
neural progenitor cell
5
5
10
7
adipocyte
4
6
4
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 96 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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