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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
chromatin state
15
eQTL
11
variant allelic effects
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
33
May, 2021
31
September, 2022
25
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
2
February, 2020
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
149
bed bed3+
76
tsv
57
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
254
Homo sapiens
Biosample type
123
primary cell
98
tissue
30
cell line
3
in vitro differentiated cells
Organ
868
epithelium
569
kidney
385
connective tissue
346
brain
294
musculature of body
254
pancreas
236
lung
225
vasculature
222
intestine
198
heart
192
limb
176
embryo
170
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
125
liver
108
extraembryonic component
96
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
214
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
163
hg19
48
GRCh38
annotation_type!
histone modifications
chromatin state
BIOSAMPLE
TYPE
254 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
eQTL
variant allelic effects
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
6
11
1
13
1
2
2
2
2
body of pancreas
2
5
8
1
1
3
pancreas
5
5
5
1
1
1
endocrine pancreas
4
7
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic ductal cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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