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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
histone modifications
810
binding sites
674
gene expression
521
accessible chromatin
167
differential activity
140
variant allelic effects
75
chromatin state
42
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
1737
February, 2021
837
September, 2022
289
June, 2020
281
September, 2023
162
February, 2024
126
May, 2020
123
May, 2021
99
October, 2022
90
August, 2021
70
March, 2023
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
28
January, 2021
26
February, 2023
20
January, 2020
19
April, 2020
12
March, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
3179
bed bed3+
794
tsv
161
bigWig
108
txt
34
bed bed9+
24
csv
13
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
4085
Homo sapiens
Biosample type
1387
primary cell
1308
tissue
1175
cell line
259
in vitro differentiated cells
1
stem cell
Organ
618
epithelium
466
kidney
251
connective tissue
195
musculature of body
190
brain
173
pancreas
152
lung
142
vasculature
139
intestine
115
limb
111
bodily fluid
111
heart
105
blood
105
skin of body
100
blood vessel
91
embryo
87
large intestine
80
eye
68
extraembryonic component
67
liver
59
stomach
50
adipose tissue
46
mammary gland
44
bone element
42
prostate gland
41
lymph node
39
small intestine
38
penis
35
artery
35
ureter
34
placenta
31
adrenal gland
26
gonad
23
esophagus
22
thymus
21
spinal cord
18
spleen
17
uterus
15
testis
13
lymphatic vessel
13
vein
12
lymphoid tissue
11
nerve
11
thyroid gland
10
mouth
10
ovary
9
bronchus
7
breast
6
bone marrow
6
tongue
5
urinary bladder
5
vagina
4
skeleton
3
trachea
2
nose
1
pericardium
1
pituitary gland
Project
3787
AMP
281
KPMP
29
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4631
hg19
GRCh38
hg18
annotation_type!
histone modifications
target gene predictions
assembly!
hg18
GRCh38
BIOSAMPLE
TYPE
4132 results
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Clear Filters
candidate regulatory elements
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
primary cell
common myeloid progenitor, CD34-positive
27
monocyte
1
15
5
1
2
1
1
epithelial cell of proximal tubule
2
1
16
1
B cell
14
2
3
endothelial cell
2
9
4
2
1
1
+ See 355 more…
tissue
heart
37
1
3
2
2
stomach
40
1
3
kidney
29
1
7
1
1
1
islet of Langerhans
2
11
2
1
3
10
2
2
2
lung
33
1
+ See 189 more…
cell line
A549
21
2
1
EndoC_BH1
1
8
7
3
1
MCF-7
9
3
1
H1-hESC
1
2
8
1
K562
7
2
1
1
+ See 634 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
1
1
adipocyte
4
1
1
4
4
embryonic stem cell
1
6
5
neural progenitor cell
5
7
cardiomyocytes
11
+ See 88 more…
stem cell
H1-hESC
1
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