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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
target gene predictions
71
chromatin state
15
accessible chromatin
9
binding sites
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
140
September, 2022
66
February, 2021
6
June, 2020
6
November, 2021
4
October, 2022
3
April, 2020
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2024
Available data
157
bed bed3+
70
bed bed9
9
bigWig
1
tsv
Organism
229
Homo sapiens
Biosample type
136
tissue
67
cell line
26
primary cell
Organ
799
epithelium
571
kidney
355
connective tissue
342
brain
288
musculature of body
229
lung
227
pancreas
227
vasculature
208
intestine
200
heart
193
limb
173
blood vessel
147
skin of body
136
bodily fluid
128
blood
125
large intestine
121
liver
120
embryo
105
extraembryonic component
96
eye
88
stomach
75
adipose tissue
67
bone element
63
mammary gland
62
artery
61
small intestine
56
prostate gland
53
placenta
52
adrenal gland
51
ureter
49
lymph node
48
penis
38
gonad
35
esophagus
34
spinal cord
34
thymus
26
spleen
23
uterus
22
nerve
21
testis
18
vein
17
lymphatic vessel
17
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
12
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
trachea
2
pituitary gland
1
pericardium
Project
220
AMP
6
ENCODE
3
LungMap
Genome assembly (visualization)
227
hg19
77
GRCh38
annotation_type!
histone modifications
target gene predictions
BIOSAMPLE
TYPE
229 results
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candidate regulatory elements
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
variant allelic effects
tissue
lung
33
16
1
1
left lung
26
13
right lung
22
11
1
upper lobe of left lung
7
3
1
1
cell line
A549
21
18
1
2
IMR-90
2
1
1
2
WI38
5
1
PC-9
2
1
1
1
NCI-H226 cell
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
2
type II pneumocyte
4
1
lung microvascular endothelial cell
3
1
type I pneumocyte
3
endothelial cell of artery
1
+ See 1 more…
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