Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
target gene predictions
44
candidate regulatory elements
22
chromatin state
13
binding sites
12
accessible chromatin
histone modifications
8
gene expression
Date released
63
September, 2022
51
February, 2024
35
February, 2021
10
June, 2020
8
August, 2021
4
May, 2021
2
November, 2021
1
August, 2017
1
March, 2020
1
October, 2022
Available data
147
bed bed3+
21
bed bed9
8
tsv
2
bigWig
Organism
176
Homo sapiens
Biosample type
122
cell line
32
tissue
in vitro differentiated cells
21
primary cell
1
stem cell
Organ
897
epithelium
645
kidney
414
brain
387
connective tissue
366
musculature of body
307
lung
281
intestine
268
pancreas
256
vasculature
248
heart
242
limb
198
blood vessel
193
bodily fluid
184
skin of body
183
blood
176
embryo
169
large intestine
136
extraembryonic component
135
liver
118
stomach
99
eye
87
adipose tissue
84
small intestine
83
bone element
81
uterus
80
mammary gland
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
58
lymph node
55
penis
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
3
trachea
1
pericardium
Project
174
AMP
2
ENCODE
Genome assembly (visualization)
168
hg19
74
GRCh38
annotation_type!
histone modifications
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
176 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
gene expression
cell line
H1-hESC
39
1
1
2
1
8
H9
8
7
1
HUES6
1
2
1
1
1
HUES8
4
1
1
H4
1
2
1
1
+ See 14 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
primary cell
trophoblast cell
5
7
4
1
primordial germ cell
1
1
placental hematopoietic stem cell
1
trophoblast giant cell
1
stem cell
H1-hESC
1
See all biosamples
Download