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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
21
candidate regulatory elements
21
gene expression
20
target gene predictions
16
chromatin state
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
39
September, 2022
26
February, 2024
18
February, 2021
10
March, 2020
7
August, 2021
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
84
bed bed3+
25
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
135
Homo sapiens
Biosample type
58
primary cell
56
tissue
21
cell line
in vitro differentiated cells
Organ
897
epithelium
645
kidney
414
brain
387
connective tissue
366
musculature of body
307
lung
281
intestine
268
pancreas
256
vasculature
248
heart
242
limb
198
blood vessel
193
bodily fluid
184
skin of body
183
blood
176
embryo
169
large intestine
136
extraembryonic component
135
liver
118
stomach
99
eye
87
adipose tissue
84
small intestine
83
bone element
81
uterus
80
mammary gland
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
58
lymph node
55
penis
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
3
trachea
1
pericardium
Project
130
AMP
5
ENCODE
Genome assembly (visualization)
106
hg19
52
GRCh38
2
hg18
annotation_type!
histone modifications
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
135 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
3
1
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
10
9
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
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