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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
histone modifications
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1666
September, 2022
1558
February, 2021
250
February, 2024
145
May, 2021
111
November, 2021
101
October, 2022
81
May, 2020
45
March, 2020
34
August, 2017
28
January, 2021
6
August, 2021
6
February, 2023
5
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2020
1
January, 2022
1
May, 2022
1
November, 2019
Available data
4044
bed bed3+
900
tsv
869
bed bed9
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
18
bigWig
7
bigBed narrowPeak
1
bam
Organism
4043
Homo sapiens
Biosample type
1564
tissue
1378
cell line
904
primary cell
192
in vitro differentiated cells
4
stem cell
Organ
310
epithelium
254
kidney
247
musculature of body
220
lung
219
brain
217
connective tissue
199
intestine
155
embryo
153
bodily fluid
153
limb
145
blood
141
heart
139
skin of body
122
large intestine
119
vasculature
98
extraembryonic component
91
blood vessel
90
pancreas
84
stomach
71
uterus
63
liver
61
mammary gland
61
small intestine
51
prostate gland
50
adrenal gland
49
bone element
49
placenta
47
ureter
46
penis
42
lymph node
41
adipose tissue
35
eye
35
thymus
31
gonad
30
artery
29
esophagus
27
spinal cord
24
spleen
16
testis
15
lymphoid tissue
15
ovary
15
thyroid gland
14
vein
12
mouth
11
nerve
10
bronchus
10
pituitary gland
9
lymphatic vessel
8
breast
7
bone marrow
7
skeleton
6
tongue
6
urinary bladder
6
vagina
2
nose
2
trachea
Project
3901
AMP
111
ENCODE
31
T1D
1
ITG
Genome assembly (visualization)
4036
hg19
303
GRCh38
1
hg18
annotation_type!
histone modifications
accessible chromatin
BIOSAMPLE
TYPE
4044 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
stomach
40
21
heart
37
20
1
2
lung
33
17
muscle of arm
33
16
1
brain
29
16
1
1
+ See 150 more…
cell line
HeLa-S3
5
55
1
A549
21
19
2
H1-hESC
1
39
2
K562
7
23
2
1
HFFc6
19
+ See 619 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
CD4-positive, alpha-beta memory T cell
14
9
CD8-positive, alpha-beta memory T cell
8
7
+ See 238 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
adipocyte
4
6
1
4
neural progenitor cell
5
5
mesenchymal stem cell
3
3
1
dendritic cell
6
+ See 64 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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