Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
481
accessible chromatin
375
target gene predictions
328
candidate regulatory elements
histone modifications
100
binding sites
76
variant allelic effects
11
caQTL
7
chromatin state
5
eQTL
3
hQTL
2
meQTL
1
other
Date released
333
November, 2021
326
September, 2022
242
February, 2021
103
February, 2024
81
May, 2020
65
May, 2021
56
January, 2021
52
June, 2020
31
October, 2022
21
January, 2020
19
April, 2020
13
August, 2021
13
May, 2022
9
November, 2022
7
August, 2017
5
October, 2019
4
February, 2023
3
March, 2020
2
January, 2022
2
November, 2020
1
June, 2021
1
September, 2023
Available data
1389
bed bed3+
591
tsv
410
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1344
Homo sapiens
Biosample type
1761
tissue
1541
cell line
1385
primary cell
254
in vitro differentiated cells
4
stem cell
Organ
428
epithelium
197
connective tissue
101
vasculature
79
skin of body
68
blood vessel
67
pancreas
52
kidney
38
mammary gland
38
musculature of body
33
liver
33
penis
32
brain
30
extraembryonic component
30
lung
23
heart
22
intestine
19
eye
18
embryo
17
artery
15
vein
13
bronchus
11
adrenal gland
11
stomach
10
lymphatic vessel
9
bone element
9
bone marrow
9
esophagus
8
placenta
8
prostate gland
7
blood
7
bodily fluid
6
large intestine
4
small intestine
4
uterus
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
3
trachea
2
ovary
1
limb
1
thymus
Project
978
AMP
333
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1383
hg19
411
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
1389 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
variant allelic effects
caQTL
chromatin state
eQTL
hQTL
meQTL
other
primary cell
common myeloid progenitor, CD34-positive
14
27
B cell
6
10
14
endothelial cell
15
7
2
2
2
1
CD14-positive monocyte
19
8
fibroblast
16
4
1
6
+ See 307 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download