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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
302
gene expression
300
accessible chromatin
200
target gene predictions
180
candidate regulatory elements
106
differential activity
101
chromatin state
74
binding sites
57
variant allelic effects
histone modifications
22
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
270
September, 2022
256
February, 2021
177
November, 2021
172
September, 2023
94
February, 2024
50
May, 2021
45
June, 2020
45
March, 2023
31
August, 2021
25
May, 2020
24
January, 2020
22
January, 2021
22
November, 2022
18
February, 2020
18
October, 2022
15
March, 2020
13
February, 2023
10
April, 2020
10
August, 2017
7
August, 2018
7
October, 2019
6
January, 2022
5
May, 2022
3
November, 2020
2
March, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
824
bed bed3+
387
tsv
231
bigWig
91
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1354
Homo sapiens
Biosample type
1071
primary cell
152
tissue
70
in vitro differentiated cells
60
cell line
1
stem cell
Organ
921
epithelium
646
kidney
433
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
969
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
2
community
Genome assembly (visualization)
934
hg19
352
GRCh38
2
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
1354 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
fibroblast
16
4
1
6
2
hepatocyte
13
8
3
1
1
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
pericyte cell
10
10
1
1
+ See 193 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 24 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
mesenchymal stem cell
1
3
3
2
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 16 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
HT1080
1
2
1
colon epithelial cell
1
1
1
fibroblast of cardiac tissue
2
1
+ See 16 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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