Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
71
chromatin state
9
binding sites
6
accessible chromatin
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
210
September, 2022
66
February, 2021
6
June, 2020
4
May, 2021
4
October, 2022
3
November, 2021
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
235
bed bed3+
70
bed bed9
bigWig
1
tsv
Organism
298
Homo sapiens
Biosample type
180
tissue
93
cell line
25
primary cell
Organ
745
epithelium
610
kidney
397
brain
380
connective tissue
352
musculature of body
298
lung
270
intestine
228
limb
227
heart
227
vasculature
214
pancreas
202
embryo
193
bodily fluid
186
skin of body
183
blood
175
blood vessel
large intestine
138
extraembryonic component
119
liver
113
stomach
83
adipose tissue
82
small intestine
80
uterus
79
mammary gland
73
bone element
71
prostate gland
69
eye
68
placenta
67
adrenal gland
61
artery
61
ureter
59
penis
58
lymph node
48
gonad
47
thymus
43
esophagus
43
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
21
vein
19
mouth
17
lymphatic vessel
13
breast
13
bronchus
12
pituitary gland
10
skeleton
10
tongue
10
urinary bladder
10
vagina
9
bone marrow
4
nose
3
trachea
1
pericardium
Project
295
AMP
3
ENCODE
Genome assembly (visualization)
296
hg19
74
GRCh38
annotation_type!
histone modifications
organ_slims!
large intestine
files.file_type!
bigWig
BIOSAMPLE
TYPE
298 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
eQTL
gene expression
variant allelic effects
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
cell line
A549
21
19
18
2
1
IMR-90
2
2
1
2
1
PC-9
2
2
1
1
1
WI38
5
1
1
NCI-H226 cell
1
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
4
2
lung microvascular endothelial cell
3
1
1
type II pneumocyte
2
1
type I pneumocyte
1
See all biosamples
Download