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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
112
candidate regulatory elements
99
target gene predictions
97
accessible chromatin
66
chromatin state
51
gene expression
41
binding sites
histone modifications
23
eQTL
19
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
168
September, 2022
108
February, 2021
56
November, 2021
24
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
14
October, 2022
13
May, 2020
12
February, 2020
12
March, 2020
11
August, 2021
11
January, 2020
8
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
381
bed bed3+
71
tsv
60
bigWig
58
bed bed9
7
txt
3
bigBed bed9
1
bigBed narrowPeak
Organism
535
Homo sapiens
Biosample type
309
primary cell
120
tissue
57
cell line
48
in vitro differentiated cells
1
stem cell
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
453
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
459
hg19
152
GRCh38
2
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
535 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
osteoblast
2
2
5
1
2
3
foreskin fibroblast
6
2
1
1
4
+ See 48 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
tibial nerve
6
3
3
4
2
2
2
3
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
cell line
MCF-7
9
6
1
5
3
T47D
3
2
2
GM23248
2
1
1
1
1
HT1080
2
1
1
MCF 10A
3
+ See 9 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
chondrocyte
5
mammary gland epithelial cell
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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