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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
183
candidate regulatory elements
119
target gene predictions
115
accessible chromatin
94
chromatin state
89
differential activity
27
variant allelic effects
19
eQTL
12
binding sites
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
269
September, 2022
207
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
25
May, 2020
21
November, 2021
20
January, 2021
19
June, 2020
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
2
April, 2019
2
March, 2024
2
November, 2019
2
October, 2022
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
456
bed bed3+
327
tsv
93
bigWig
90
bed bed9
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
917
Homo sapiens
Biosample type
432
primary cell
409
tissue
72
cell line
4
in vitro differentiated cells
Organ
921
epithelium
646
kidney
433
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
734
AMP
140
KPMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
561
hg19
166
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
917 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
binding sites
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
pancreatic ductal cell
3
3
6
3
1
1
+ See 80 more…
tissue
kidney
7
29
14
10
16
1
1
1
islet of Langerhans
11
1
6
3
1
13
2
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 26 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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