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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
107
candidate regulatory elements
93
accessible chromatin
93
target gene predictions
61
chromatin state
50
gene expression
39
binding sites
histone modifications
20
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
159
September, 2022
106
February, 2021
50
November, 2021
25
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
361
bed bed3+
64
tsv
55
bigWig
54
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
504
Homo sapiens
Biosample type
279
primary cell
107
tissue
71
cell line
46
in vitro differentiated cells
1
stem cell
Organ
921
epithelium
646
kidney
433
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
430
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
431
hg19
136
GRCh38
2
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
504 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
osteoblast
2
5
2
1
2
3
foreskin fibroblast
6
1
2
1
4
+ See 45 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
prostate gland
4
1
2
2
2
1
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
cell line
22Rv1
4
2
2
1
LNCaP clone FGC
3
2
2
GM23248
2
1
1
1
1
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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