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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
49
gene expression
target gene predictions
33
differential activity
28
candidate regulatory elements
19
chromatin state
16
eQTL
11
variant allelic effects
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
34
September, 2022
26
May, 2021
25
February, 2021
25
February, 2024
11
November, 2021
10
January, 2021
8
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
5
January, 2022
4
June, 2020
3
August, 2017
3
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
113
bed bed3+
77
tsv
54
bigWig
15
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
235
Homo sapiens
Biosample type
105
tissue
99
primary cell
28
cell line
3
in vitro differentiated cells
Organ
799
epithelium
571
kidney
357
connective tissue
342
brain
288
musculature of body
229
lung
227
pancreas
227
vasculature
208
intestine
200
heart
193
limb
173
blood vessel
147
skin of body
136
bodily fluid
128
blood
125
large intestine
121
liver
120
embryo
105
extraembryonic component
96
eye
88
stomach
75
adipose tissue
67
bone element
63
mammary gland
62
artery
61
small intestine
56
prostate gland
53
placenta
52
adrenal gland
51
ureter
49
lymph node
48
penis
38
gonad
35
esophagus
34
spinal cord
34
thymus
26
spleen
23
uterus
22
nerve
21
testis
18
vein
17
lymphatic vessel
17
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
12
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
trachea
2
pituitary gland
1
pericardium
Project
212
AMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
142
hg19
57
GRCh38
annotation_type!
histone modifications
target gene predictions
BIOSAMPLE
TYPE
235 results
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Clear Filters
accessible chromatin
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
11
3
13
1
2
2
2
2
body of pancreas
2
8
4
1
1
3
pancreas
5
5
3
1
1
1
endocrine pancreas
7
4
vagina
1
4
2
1
+ See 7 more…
primary cell
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic ductal cell
6
3
3
1
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
3
3
1
+ See 10 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
pancreatic ductal cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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